tactic

targeting transcriptional addiction in cancer

Research Topic

Cancer develops due to genetic and epigenetic alterations that invariably lead to dysregulated transcriptional programs. Gene expression is controlled by the combined action of transcription factors (TFs) and proteins regulating chromatin structure through epigenetic modifications on both, DNA and histones. The basal transcription machinery itself is controlled at many levels, including by a variety of post -translational modifications. Finally, also mRNA is regulated by pre-mRNA splicing events and RNA modifications, as well as mRNA-binding proteins. These mechanisms provide a rich portfolio of targets for pharmacological intervention and the development of the next generation of cancer medicines. As tumor cells require higher transcriptional rates than normal cells – termed transcriptional addiction - due to their constant progression through the cell cycle and increased proliferation, they rely on both fundamentally altered and overall increased transcription, defining the underlying cellular machinery as a priority cancer target. However, most oncogenic TFs cannot be directly targeted by small molecules. To address this challenge, we propose a program that targets transcriptional regulators that are highly dysfunctional in cancer, driving tumorigenesis. To date, the transcriptional machinery has been poorly explored by conventional drug discovery efforts, but this area has now become accessible by the development of small molecules targeting chromatin modifiers and the advent of new pharmacological modalities, such as selective protein degraders (PROTACs). Transcriptional regulators belong to diverse target families, allowing us to establish a risk-balanced project portfolio, ranging from “low risk” drug target families, such as protein kinases and nuclear receptors (LXR), to more challenging targets such as protein-protein interaction surfaces. Importantly, the selected targets or targeting strategies have not been in the primary focus of industrial drug development programs. The proposed portfolio comprises kinases (CDK11, CDK12, AKT (covalent allosteric)), chromatin-modifying enzymes (e.g. KDM5, BET-HDAC (dual inhibitor)), and the more challenging targets, such as protein-interaction domains and AAA-domain/ATP hydrolases (e.g. WDR5, BRPF, ATAD2). In addition to conventional small-molecule inhibitors, we also

propose to develop new pharmaceutical modalities, such as selective protein degraders (PROTACs). In order to carry out this ambitious program, we established a network of state-of-the-art cancer and drug development laboratories, creating the national oncology drug discovery hub (Targeting transcriptional AddiCTion In Cancer, TACTIC). This hub comprises experts, covering all aspects of drug discovery, including high-throughput screening (MPI Dortmund), assay development and rational inhibitor design by highthroughput structural biology (Frankfurt), medicinal chemistry groups (Tübingen, Dortmund), expertise in PROTAC development (Frankfurt, Würzburg), chemical proteomics (Munich), ADME/Tox studies (Dortmund, Tübingen), the integrated drug discovery & development platform TüCADD (Tübingen), as well as a network of disease experts, covering the major tumor types with mechanistic and patient-derived cellular and in vivo models (Cologne, Essen, Tübingen, Frankfurt). Thus, the consortium incorporates partners that ultimately generate a fully functional experimental drug discovery value chain. Development of small molecules is envisioned to reach the drug candidate stage, and further clinical development will be realized by collaborating translational networks (CCC network, NCT, DKTK), charities (M4K), and industry partners. All participating research groups have a long-standing interest in cancer-specific transcription control, and a proven track record of ongoing collaborations, including all key technologies required for the proposed program.

Project Team

Prof. Dr. Stefan Knapp

Prof. Dr. Stefan Knapp

Speaker

Goethe University, Institute for Pharmaceutical Chemistry, Frankfurt

Prof. Dr. Stefan Laufer

Prof. Dr. Stefan Laufer

Co-Speaker

Pharmaceutical and Medicinal Chemistry, Eberhard-Karls-Universität Tübingen

Prof. Dr. Daniel Rauh

Prof. Dr. Daniel Rauh

Co-Speaker

TU University Dortmund

Prof. Dr. Christian Reinhardt

Prof. Dr. Christian Reinhardt

Speaker of the joint preCDD Consortia

University Hospital Essen Department of Hematology and Stem Cell Transplantation, Essen

Prof. Dr. Elmar Wolf

Prof. Dr. Elmar Wolf

Co-Speaker

Unit for Tumor Biochemistry, 
Christian-Albrechts-Universität zu Kiel

Prof. Dr. Christian Brandts

Prof. Dr. Christian Brandts

UCT Freiburg-Marburg, University Cancer Center

Director

Prof. Dr. M. Eilers

Prof. Dr. M. Eilers

Julius-Maximilians-Universität Würzburg 
Theodor-Boveri-Institut, Chair of biochemistry and molecular biology

Group Leader

PD Dr. Henner Farin

PD Dr. Henner Farin

Georg Speyer Haus Institute for Tumor Biology and experimental Therapy, Frankfurt

Group Leader

Prof. Dr. Matthias Gehringer

Prof. Dr. Matthias Gehringer

Eberhard Karls Universität Tübingen, Pharmaceutical and Medicinal Chemistry

Dr. Florian Greten

Dr. Florian Greten

Georg-Speyer-Haus Institute for Tumor Biology and experimental Therapy, Frankfurt

Director/ Research Group Leader

Prof. Dr. Jan Hengstler

Prof. Dr. Jan Hengstler

IfADo Leibniz-Institut, Toxicology Department, TU Dortmund

Head of Department

Dr. Andreas C. Joerger

Dr. Andreas C. Joerger

Goethe University, p53 Drug Discovery and Transcriptional Regulation, Frankfurt

Principal Investigator

Prof. Dr. Jan-Henning Klusmann

Prof. Dr. Jan-Henning Klusmann

Klinik für Kinder- und Jugendmedizin, Universitätsmedizin Frankfurt

Prof. Dr. Bernhard Küster

Prof. Dr. Bernhard Küster

Technical University of Munich

Dr. Susanne Müller-Knapp

Dr. Susanne Müller-Knapp

SGC Frankfurt Goethe Universität Frankfurt Buchmann Institute for Molecular Life Sciences Frankfurt Cancer Institute Honorary member Institute for Cancer Research

Chief Operating Officer

Prof. Dr. Sina Oppermann

Prof. Dr. Sina Oppermann

Georg Speyer Haus, Institute of Pharmacology and Clinical Pharmacy, Frankfurt

Research Group Leader

Prof. Dr. Eugen Proschak

Prof. Dr. Eugen Proschak

Institute of Pharmaceutical Chemistry, Frankfurt

Dr. Sonja Sievers

Dr. Sonja Sievers

Max-Planck-Institute for molecular Physiology, COMAS, Dortmund

Head

Prof. Dr. Jens Siveke

Prof. Dr. Jens Siveke

Universitätsmedizin Essen, Westdeutsches Tumorzentrum, Deutsches Krebsforschungszentrum (DKFZ)

Prof. Dr. Roman Thomas

Prof. Dr. Roman Thomas

University of Cologne, Department of Translational Genomics

Dr. Stephanie Wilhelm

Dr. Stephanie Wilhelm

Technische Universität München
Chair of Proteomics and Bioanalytics

Institutions

Publications

  1. Adhikari, B., K. Schneider, M. Diebold, C. Sotriffer, and E. Wolf, Identification of suitable target/E3 ligase pairs for PROTAC development using a rapamycin-induced proximity assay (RiPA). Elife, 2024. 13.
  2. Kramer, A. and S. Knapp, Elimination of mutant SWI/SNF complexes by protein quality control: new opportunities targeting aggressive rhabdoid tumours. Signal Transduct Target Ther, 2024. 9(1): p. 224.
  3. Vogt, M., N. Dudvarski Stankovic, Y. Cruz Garcia, J. Hofstetter, K. Schneider, F. Kuybu, T. Hauck, B. Adhikari, A. Hamann, Y. Rocca, L. Grysczyk, B. Martin, A. Gebhardt-Wolf, A. Wiegering, M. Diefenbacher, G. Gasteiger, S. Knapp, D. Saur, M. Eilers, M. Rosenfeldt, F. Erhard, S.M. Vos, and E. Wolf, Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2. Gut, 2024. 73(9): p. 1509-1528.
  4. Sflakidou, E., B. Adhikari, C. Siokatas, E. Wolf, and V. Sarli, Development of 2-Aminoadenine-Based Proteolysis-Targeting Chimeras (PROTACs) as Novel Potent Degraders of Monopolar Spindle 1 and Aurora Kinases. ACS Pharmacol Transl Sci, 2024. 7(11): p. 3488-3501.